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Useful Links

  • BarraCUDA SourceForge Page

    Related software

  • BWA from The Wellcome Trust Sanger Institute
  • TPX-patch file for multithread BWA SAMSE/SAMPE cores from Convey Computer
  • SAMTools from The Wellcome Trust Sanger Institute
  • The Genome Analysis Toolkit - GATK from The Broad Institute

    Reference data downloads

  • Human reference sequence (Build GRCh37) from the 1000 Genomes Project
  • Other reference genomes from the UCSC genome browser

    Other useful web sites

  • 1000 Genomes Project
  • UCSC Genome Browser
  • Ensembl Database